Broadcast spawning in Porites lutea at Reunion Island (Western Indian Ocean)

This study report in situ observations of broadcast spawning of P. lutea on a shallow reef flat of Reunion Island

A Minimization Method for Relativistic Electrons in a Mean-Field Approximation of Quantum Electrodynamics

We study a mean-field relativistic model which is able to describe both the behavior of finitely many spin-1/2 particles like electrons and of the Dirac sea which is self-consistently polarized in the presence of the real particles. The model is derived from the QED Hamiltonian in Coulomb gauge neglecting the photon field. All our results are non-perturbative and mathematically rigorous.Comment: 18 pages, 3 figure

Renormalization and asymptotic expansion of Dirac's polarized vacuum

We perform rigorously the charge renormalization of the so-called reduced Bogoliubov-Dirac-Fock (rBDF) model. This nonlinear theory, based on the Dirac operator, describes atoms and molecules while taking into account vacuum polarization effects. We consider the total physical density including both the external density of a nucleus and the self-consistent polarization of the Dirac sea, but no `real' electron. We show that it admits an asymptotic expansion to any order in powers of the physical coupling constant \alphaph, provided that the ultraviolet cut-off behaves as \Lambda\sim e^{3\pi(1-Z_3)/2\alphaph}\gg1. The renormalization parameter $

Construction of the Pauli-Villars-regulated Dirac vacuum in electromagnetic fields

Using the Pauli-Villars regularization and arguments from convex analysis, we construct solutions to the classical time-independent Maxwell equations in Dirac's vacuum, in the presence of small external electromagnetic sources. The vacuum is not an empty space, but rather a quantum fluctuating medium which behaves as a nonlinear polarizable material. Its behavior is described by a Dirac equation involving infinitely many particles. The quantum corrections to the usual Maxwell equations are nonlinear and nonlocal. Even if photons are described by a purely classical electromagnetic field, the resulting vacuum polarization coincides to first order with that of full Quantum Electrodynamics.Comment: Final version to appear in Arch. Rat. Mech. Analysi

PWPS bacterial cultures

Sequences (16S rRNA gene) of the bacterial isolates used in phase 1 of the inoculation experiment. The software used to create the data file (fasta) is Genesious

Ciliate communities consistently associated with coral diseases

Incidences of coral disease are increasing. Most studies which focus on diseases in these organisms routinely assess variations in bacterial associates. However, other microorganism groups such as viruses, fungi and protozoa are only recently starting to receive attention. This study aimed at assessing the diversity of ciliates associated with coral diseases over a wide geographical range. Here we show that a wide variety of ciliates are associated with all nine coral diseases assessed. Many of these ciliates such as Trochilia petrani and Glauconema trihymene feed on the bacteria which are likely colonizing the bare skeleton exposed by the advancing disease lesion or the necrotic tissue itself. Others such as Pseudokeronopsis and Licnophora macfarlandi are common predators of other protozoans and will be attracted by the increase in other ciliate species to the lesion interface. However, a few ciliate species (namely Varistrombidium kielum, Philaster lucinda, Philaster guamense, a Euplotes sp., a Trachelotractus sp. and a Condylostoma sp.) appear to harbor symbiotic algae, potentially from the coral themselves, a result which may indicate that they play some role in the disease pathology at the very least. Although, from this study alone we are not able to discern what roles any of these ciliates play in disease causation, the consistent presence of such communities with disease lesion interfaces warrants further investigation

Molecular Investigation of Recurrent Streptococcus iniae Epizootics Affecting Coral Reef Fish on an Oceanic Island Suggests at Least Two Distinct Emergence Events

International audienceStreptococcus iniae is an emerging zoonotic pathogen of increasing concern for aquaculture and has caused several epizootics in reef fishes from the Caribbean, the Red Sea and the Indian Ocean. To study the population structure, introduction pathways and evolution of S. iniae over recurring epizootics on Reunion Island, we developed and validated a Multi Locus Sequence Typing (MLST) panel using genomic data obtained from 89 isolates sampled during epizootics occurring over the past 40years in Australia, Asia, the United States, Israel and Reunion Island. We selected eight housekeeping loci, which resulted in the greatest variation across the main S. iniae phylogenetic clades highlighted by the whole genomic dataset. We then applied the developed MLST to investigate the origin of S . iniae responsible for four epizootics on Reunion Island, first in inland aquaculture and then on the reefs from 1996 to 2014. Results suggest at least two independent S . iniae emergence events occurred on the island. Molecular data support that the first epizootic resulted from an introduction, with inland freshwater aquaculture facilities acting as a stepping-stone. Such an event may have been facilitated by the ecological flexibility of S. iniae , able to survive in both fresh and marine waters and the ability of the pathogen to infect multiple host species. By contrast, the second epizootic was associated with a distinct ST of cosmopolitan distribution that may have emerged as a result of environment disturbance. This novel tool will be effective at investigating recurrent epizootics occurring within a given environment or country that is despite the fact that S. iniae appears to have low genetic diversity within its lineage

Characterisation of an atypical manifestation of black band disease on Porites lutea in the Western Indian Ocean

International audienceRecent surveys conducted on Reunion Island coral reefs revealed an atypical manifestation of black band disease on the main framework building coral, Porites lutea. This BBD manifestation (PorBBD) presented a thick lighter-colored band, which preceded the typical BBD lesion. Whilst BBD aetiology has been intensively described worldwide, it remains unclear if corals with apparently similar lesions across coral reefs are affectedby the same pathogens. Therefore, a multidisciplinary approach involving field surveys, gross lesion monitoring, histopathology and 454-pyrosequencing was employed to provide the first comprehensive characterization of this particular manifestation.Surveys conducted within two geomorphological zones over two consecutive summers and winters showed spatial and seasonal patterns consistent with those found for typical BBD. Genetic analyses suggested an uncharacteristically high level of Vibrio spp. bacterial infection within PorBBD. However, microscopic analysis revealed high densities of cyanobacteria, penetrating the compromised tissue as well as the presenceof basophilic bodies resembling bacterial aggregates in the living tissue, adjacent to the bacterial mat. Additionally, classical BBD-associated cyanobacterial strains, genetically related to Pseudoscillatoria coralii and Roseofilum reptotaenium were identified and isolated and the presence of sulfate-reducers or sulfide-oxidizers such as Desulfovibrio and Arcobacter, previously shown to be associated with anoxic microenvironmentwithin typical BBD was also observed, confirming that PorBBD is a manifestation of classical BBD

Tree for the 16S rRNA gene

Neighbour-joining phylogenetic tree for the 16S rRNA gene gene showing the relatedness of the strain P180R with reference Vibrio strains. The software used to create the data (Newick) is Geneious 6.1.5

Data from: Identification of a bacterial pathogen associated with Porites white patch syndrome in the Western Indian Ocean

Porites white patch syndrome (PWPS) is a coral disease recently described in the western Indian Ocean. This study aimed to isolate and identify potential pathogens associated with PWPS utilising both culture and non-culture screening techniques and inoculation trials. A total of 14 bacterial strains (those dominant in disease lesions, absent or rare in healthy tissues and considered potential pathogens in a previous study) were cultured and used to experimentally inoculate otherwise healthy individuals in an attempt to fulfil Henle-Koch's postulates. However, only one (P180R), identified as closely related (99-100% sequence identity based on 1.4 kb 16S RNA sequence) to Vibrio tubiashii, elicited signs of disease in tank experiments. Following experimental infection (which resulted in a 90% infection rate), the pathogen was also successfully re-isolated from the diseased tissues and re-inoculated in healthy corals colonies, therefore fulfilling the final stages of Henle-Koch's postulates. Finally we report that PWPS appears to be a temperature-dependent disease, with significantly higher tissue loss (ANOVA: df= 2, F=39.77, P<0.01) occurring at 30°C (1.45 ± 0.85 cm2 day−1 (mean ± SE)) compared to ambient temperatures of 28°C and 26°C (0.73 ± 0.80 cm2 day−1 (mean ± SE) and 0.51 ± 0.50 cm2 day−1 (mean ± SE), respectively)